Category: Particle

Subject

PPUnix - Best Practice

Content

Interactive Servers

pplxintn at al. are intended for interactive use, program development, and testing only. Therefore:

  • Running of long jobs i.e. greater than 10 minutes is discouraged, submit to the batch system (>400 cpu's available)
  • If you do run a cpu intensive test job use nice or renice to set it to a low priority, by setting it to nice level 19.
  • Avoid running multiple or multi-core intensive jobs. We may kill these without notice to preserve usability for others.
  • Avoid network or disk intensive work on the interactive machines.
  • Avoid memory (RAM) intensive work on the interactive machines. Prolonged use of more than 4GB is not acceptable. Short, test jobs of up to 12GB are OK, but the system will protect other users if more is used.
  • Low intensity jobs can be run in the background using the "screen" command. To start a new session with a title "mySession" use "screen -S mySession". You can detatch by pressing "ctrl+A, then D". You can then log off and go home. The next day your session will still be running. Connect to it with "screen -x mySession".
  • If you think you need an exception to these rules, please email us at itsupport@physics.ox.ac.uk first.

If you do need to do something outside of these above 'best practice' rules, we can probably set something up but for everyone else's sake, don't generally go against these on the interactive machines.

Please log out of the interactive machines when you're done for the evening.

Familiarize yourself with the installed software. Software and development environments can be made available on request. The environments are activated using the "module load" command. To get a list of available software, use "module avail". Your experiments will also maintain software separately.

You have access to at least two areas in which to store your files.

  • Your default directory when you log in is /home/{username}. This is an area to store data that needs to be backed up and is limited to 30GB by default. We can increase this on request.
  • Each experiment also has a data disk, accessible from /data/{experiment}. You should store any large files here that are easy to reproduce by re-running scripts or are available in other places, e.g. from the grid. Data areas are not backed up at all.

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Drupal page URL06-12-2024 10:33
Writer: Vipul Davda
Created on 15-10-2012 04:10
Last update on 20-02-2025 14:37
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